Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015826468.1_cds_XP_016502661.1_16277
CDS Infomation

[gene=LOC107820833] [db_xref=GeneID:107820833] [protein=rop guanine nucleotide exchange factor 12-like] [protein_id=XP_016502661.1] [location=complement(join(10513..10923,11623..11943,12045..12305,12391..12465,12740..12967))] [gbkey=CDS]
Sequence

ATGACATTCATTCTATATTCTCATAATAATACTTTCTTTGTTCCTATCTTTTTTTCTTTA
CTCATGTATGCAGCTTCTGCTTTTGGGGAACAGAAGAGATTAGAGCCAATGCCAGCTGAG
AGAAAAGCTAAATGGAGAAGAGAAATTGATTGGCCGTTATCTGTAACAGATCACATTGTT
GAATTTGTTCCTTCTAAACAAAAATCAAAAGACGGAACAAGTATGGAGGTTATGGTGACA
AAGCAAAGAACCGATCTTCAAATGAATATTCCAGCACTACGCAAGCTAGACGCTATGCTT
CTTGATTGCTTAGATAACTTTAAAGATCAAAATGAGTTTTCCTATTCATCGAAGGATGAC
GAATCACAAGAAGGGAGGAAAGATGATAAATGGTGGATACCAACTCCTAAGGTTCCTCCT
AATGGCTTGTCCGATGTTACAAGGAAATGGCTGCAATTTCAGAAGGATTCAGTAAACCAA
GTTCTTAAAGCAGCCATGGCTATAAATGCTCAAGTCCTGTCGGAAATGGAGATCCCCGAA
AGTTATATAGACTCCCTACCCAAGAATGGGAGAGCAAGTCTTGGAGATGCAATCTATAAG
AGCATCACTGATGAATACTTTGATCCTGACTACTTCCTCACAACTATGGACTTGTCTTCA
GAACATAAGATTTTAGACCTCAAGAACAAACTTGAGGCTTCTGTAATTATTTGGCGACGA
AAGATGACTGCTAAAGATGGGAAGTCAGCATGGGGTTCAGCTGTTAGTTTAGAGAAGAGA
GAAATCTTTGAAGAAAGAGCAGAGACTATCTTGCTTATTCTTAAGCAGCGCTTCCCTGGA
ATTCCTCAGTCATCTCTAGACATTAGCAAAATCCAATACAATGGGGATGTGGGGCAAGCT
ATTTTAGAAAGCTATTCAAGAATATTAGAGAGCAGGGCACACACAGTCATGTCAAGGATT
GAAGATGTTCTCCAAGCAGATGCAACGGCCCAAAATCCTTCGAGTGCTGAAGTAAAAAGG
TTTCCTCTAAGAGATTCATTACGTGTATGTCCATCAGGCAGATTCCCAAATGCTAAGGAA
GAAGTAGAAAAGCTTAACTCTGTGGAGAATCCAACTTCAATGACACTGTTGGATTTCATG
GGTTGGACAGTGGAACAAGGAGAAAATGACGCAAAGAAAGATTTGAAGGAGGACATAGAC
ATTGATGCGAAGAAACCACCTAACATAGTCACAAACAAGAAAAGTTCTTACTTAGAGAAC
TTAGTTGGTTCTAGAAGTCCCACAGCACGCCACTAA

Peptide Sequence

PEP ID

XP_016502661.1
PEP Infomation

PREDICTED: rop guanine nucleotide exchange factor 12-like [Nicotiana tabacum]
Sequence

MTFILYSHNNTFFVPIFFSLLMYAASAFGEQKRLEPMPAERKAKWRREIDWPLSVTDHIV
EFVPSKQKSKDGTSMEVMVTKQRTDLQMNIPALRKLDAMLLDCLDNFKDQNEFSYSSKDD
ESQEGRKDDKWWIPTPKVPPNGLSDVTRKWLQFQKDSVNQVLKAAMAINAQVLSEMEIPE
SYIDSLPKNGRASLGDAIYKSITDEYFDPDYFLTTMDLSSEHKILDLKNKLEASVIIWRR
KMTAKDGKSAWGSAVSLEKREIFEERAETILLILKQRFPGIPQSSLDISKIQYNGDVGQA
ILESYSRILESRAHTVMSRIEDVLQADATAQNPSSAEVKRFPLRDSLRVCPSGRFPNAKE
EVEKLNSVENPTSMTLLDFMGWTVEQGENDAKKDLKEDIDIDAKKPPNIVTNKKSSYLEN
LVGSRSPTARH

Transcript Sequence

Gene sequence data has not been registered.